encode-toolkit

MCP serverGitHubActivePython

MCP server and Claude Code plugin for the ENCODE Project: search, download and analyze ChIP-seq, ATAC-seq, RNA-seq, WGBS, Hi-C and CUT&RUN data with 20 tools, 47 skills and 7 Nextflow pipelines

Description provenance: Original source

Open canonical source

Measured: Oct 21, 2026 · 70 observations

Domains & Uses

Domains: Agents, skills and MCP
Uses: Agent skills, Code assistants

Check at the source

Compatibility and prerequisites must be checked in the official documentation.

https://github.com/ammawla/encode-toolkit

Classifications

Nature: Tool

Measurement history

Comparable readings are grouped by signal and unit.

Stars

21stars · Oct 21, 2026

+1 (+5 %)since Sep 22, 2026

Exact values · 30 readings

Measured	stars	Change
Oct 21, 2026	21	0
Oct 20, 2026	21	0
Oct 19, 2026	21	0
Oct 18, 2026	21	0
Oct 17, 2026	21	0
Oct 16, 2026	21	0
Oct 15, 2026	21	0
Oct 14, 2026	21	0
Oct 13, 2026	21	0
Oct 12, 2026	21	0
Oct 11, 2026	21	0
Oct 10, 2026	21	0
Oct 9, 2026	21	0
Oct 8, 2026	21	0
Oct 7, 2026	21	0
Oct 6, 2026	21	0
Oct 5, 2026	21	0
Oct 4, 2026	21	0
Oct 3, 2026	21	0
Oct 2, 2026	21	0
Oct 1, 2026	21	0
Sep 30, 2026	21	0
Sep 29, 2026	21	0
Sep 28, 2026	21	+1
Sep 27, 2026	20	0
Sep 26, 2026	20	0
Sep 25, 2026	20	0
Sep 24, 2026	20	0
Sep 23, 2026	20	0
Sep 22, 2026	20	·